scout/commands/update/hpo.py
def hpo(context):
    """
    Update the hpo terms in the database. Fetch the latest release and update terms.
    """
    LOG.info("Running scout update hpo")
    adapter = context.obj['adapter']

    LOG.info("Dropping HPO terms")
    adapter.hpo_term_collection.drop()
    LOG.debug("HPO terms dropped")

    load_hpo_terms(adapter)
def hpo(context):
    """
    Update the hpo terms in the database. Fetch the latest release and update terms.
    """
    LOG.info("Running scout update hpo")
    adapter = context.obj['adapter']

    LOG.info("Dropping HPO terms")
    adapter.hpo_term_collection.drop()
    LOG.debug("HPO terms dropped")

    load_hpo_terms(adapter)
def hpo ( context ) : LOG . info ( "Running scout update hpo" ) adapter = context . obj [ 'adapter' ] LOG . info ( "Dropping HPO terms" ) adapter . hpo_term_collection . drop ( ) LOG . debug ( "HPO terms dropped" ) load_hpo_terms ( adapter )
Update the hpo terms in the database. Fetch the latest release and update terms.
Update the hpo terms in the database . Fetch the latest release and update terms .