ipyrad/assemble/demultiplex.py
def get_barcode_func(data, longbar):
    """ returns the fastest func given data & longbar"""
    ## build func for finding barcode
    if longbar[1] == 'same':
        if data.paramsdict["datatype"] == '2brad':
            def getbarcode(cutters, read1, longbar):
                """ find barcode for 2bRAD data """
                return read1[1][:-(len(cutters[0][0]) + 1)][-longbar[0]:]

        else:
            def getbarcode(_, read1, longbar):
                """ finds barcode for invariable length barcode data """
                return read1[1][:longbar[0]]
    else:
        def getbarcode(cutters, read1, longbar):
            """ finds barcode for variable barcode lengths"""
            return findbcode(cutters, longbar, read1)
    return getbarcode
def get_barcode_func(data, longbar):
    """ returns the fastest func given data & longbar"""
    ## build func for finding barcode
    if longbar[1] == 'same':
        if data.paramsdict["datatype"] == '2brad':
            def getbarcode(cutters, read1, longbar):
                """ find barcode for 2bRAD data """
                return read1[1][:-(len(cutters[0][0]) + 1)][-longbar[0]:]

        else:
            def getbarcode(_, read1, longbar):
                """ finds barcode for invariable length barcode data """
                return read1[1][:longbar[0]]
    else:
        def getbarcode(cutters, read1, longbar):
            """ finds barcode for variable barcode lengths"""
            return findbcode(cutters, longbar, read1)
    return getbarcode
def get_barcode_func ( data , longbar ) : ## build func for finding barcode if longbar [ 1 ] == 'same' : if data . paramsdict [ "datatype" ] == '2brad' : def getbarcode ( cutters , read1 , longbar ) : """ find barcode for 2bRAD data """ return read1 [ 1 ] [ : - ( len ( cutters [ 0 ] [ 0 ] ) + 1 ) ] [ - longbar [ 0 ] : ] else : def getbarcode ( _ , read1 , longbar ) : """ finds barcode for invariable length barcode data """ return read1 [ 1 ] [ : longbar [ 0 ] ] else : def getbarcode ( cutters , read1 , longbar ) : """ finds barcode for variable barcode lengths""" return findbcode ( cutters , longbar , read1 ) return getbarcode
returns the fastest func given data & longbar
returns the fastest func given data & longbar