ipyrad/assemble/rawedit.py
def assembly_cleanup(data):
    """ cleanup for assembly object """

    ## build s2 results data frame
    data.stats_dfs.s2 = data._build_stat("s2")
    data.stats_files.s2 = os.path.join(data.dirs.edits, 's2_rawedit_stats.txt')

    ## write stats for all samples
    with io.open(data.stats_files.s2, 'w', encoding='utf-8') as outfile:
        data.stats_dfs.s2.fillna(value=0).astype(np.int).to_string(outfile)
def assembly_cleanup(data):
    """ cleanup for assembly object """

    ## build s2 results data frame
    data.stats_dfs.s2 = data._build_stat("s2")
    data.stats_files.s2 = os.path.join(data.dirs.edits, 's2_rawedit_stats.txt')

    ## write stats for all samples
    with io.open(data.stats_files.s2, 'w', encoding='utf-8') as outfile:
        data.stats_dfs.s2.fillna(value=0).astype(np.int).to_string(outfile)
def assembly_cleanup ( data ) : ## build s2 results data frame data . stats_dfs . s2 = data . _build_stat ( "s2" ) data . stats_files . s2 = os . path . join ( data . dirs . edits , 's2_rawedit_stats.txt' ) ## write stats for all samples with io . open ( data . stats_files . s2 , 'w' , encoding = 'utf-8' ) as outfile : data . stats_dfs . s2 . fillna ( value = 0 ) . astype ( np . int ) . to_string ( outfile )
cleanup for assembly object
cleanup for assembly object