src/pybel_tools/analysis/stability.py
def get_correlation_graph(graph: BELGraph) -> Graph:
    """Extract an undirected graph of only correlative relationships."""
    result = Graph()

    for u, v, d in graph.edges(data=True):
        if d[RELATION] not in CORRELATIVE_RELATIONS:
            continue

        if not result.has_edge(u, v):
            result.add_edge(u, v, **{d[RELATION]: True})

        elif d[RELATION] not in result[u][v]:
            log.log(5, 'broken correlation relation for %s, %s', u, v)
            result[u][v][d[RELATION]] = True
            result[v][u][d[RELATION]] = True

    return result
def get_correlation_graph(graph: BELGraph) -> Graph:
    """Extract an undirected graph of only correlative relationships."""
    result = Graph()

    for u, v, d in graph.edges(data=True):
        if d[RELATION] not in CORRELATIVE_RELATIONS:
            continue

        if not result.has_edge(u, v):
            result.add_edge(u, v, **{d[RELATION]: True})

        elif d[RELATION] not in result[u][v]:
            log.log(5, 'broken correlation relation for %s, %s', u, v)
            result[u][v][d[RELATION]] = True
            result[v][u][d[RELATION]] = True

    return result
def get_correlation_graph ( graph : BELGraph ) -> Graph : result = Graph ( ) for u , v , d in graph . edges ( data = True ) : if d [ RELATION ] not in CORRELATIVE_RELATIONS : continue if not result . has_edge ( u , v ) : result . add_edge ( u , v , * * { d [ RELATION ] : True } ) elif d [ RELATION ] not in result [ u ] [ v ] : log . log ( 5 , 'broken correlation relation for %s, %s' , u , v ) result [ u ] [ v ] [ d [ RELATION ] ] = True result [ v ] [ u ] [ d [ RELATION ] ] = True return result
Extract an undirected graph of only correlative relationships.
Extract an undirected graph of only correlative relationships .