examples/src/main/java/org/apache/spark/examples/mllib/JavaGaussianMixtureExample.java
/*
 * Licensed to the Apache Software Foundation (ASF) under one or more
 * contributor license agreements.  See the NOTICE file distributed with
 * this work for additional information regarding copyright ownership.
 * The ASF licenses this file to You under the Apache License, Version 2.0
 * (the "License"); you may not use this file except in compliance with
 * the License.  You may obtain a copy of the License at
 *
 *    http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
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package org.apache.spark.examples.mllib;

import org.apache.spark.SparkConf;
import org.apache.spark.api.java.JavaSparkContext;

// $example on$
import org.apache.spark.api.java.JavaRDD;
import org.apache.spark.mllib.clustering.GaussianMixture;
import org.apache.spark.mllib.clustering.GaussianMixtureModel;
import org.apache.spark.mllib.linalg.Vector;
import org.apache.spark.mllib.linalg.Vectors;
// $example off$

public class JavaGaussianMixtureExample {
  public static void main(String[] args) {

    SparkConf conf = new SparkConf().setAppName("JavaGaussianMixtureExample");
    JavaSparkContext jsc = new JavaSparkContext(conf);

    // $example on$
    // Load and parse data
    String path = "data/mllib/gmm_data.txt";
    JavaRDD<String> data = jsc.textFile(path);
    JavaRDD<Vector> parsedData = data.map(s -> {
      String[] sarray = s.trim().split(" ");
      double[] values = new double[sarray.length];
      for (int i = 0; i < sarray.length; i++) {
        values[i] = Double.parseDouble(sarray[i]);
      }
      return Vectors.dense(values);
    });
    parsedData.cache();

    // Cluster the data into two classes using GaussianMixture
    GaussianMixtureModel gmm = new GaussianMixture().setK(2).run(parsedData.rdd());

    // Save and load GaussianMixtureModel
    gmm.save(jsc.sc(), "target/org/apache/spark/JavaGaussianMixtureExample/GaussianMixtureModel");
    GaussianMixtureModel sameModel = GaussianMixtureModel.load(jsc.sc(),
      "target/org.apache.spark.JavaGaussianMixtureExample/GaussianMixtureModel");

    // Output the parameters of the mixture model
    for (int j = 0; j < gmm.k(); j++) {
      System.out.printf("weight=%f\nmu=%s\nsigma=\n%s\n",
        gmm.weights()[j], gmm.gaussians()[j].mu(), gmm.gaussians()[j].sigma());
    }
    // $example off$

    jsc.stop();
  }
}
