Update README.md
Browse files
README.md
CHANGED
|
@@ -1,3 +1,161 @@
|
|
| 1 |
-
---
|
| 2 |
-
license: apache-2.0
|
| 3 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
---
|
| 2 |
+
license: apache-2.0
|
| 3 |
+
language:
|
| 4 |
+
- en
|
| 5 |
+
base_model:
|
| 6 |
+
- openmmlab/mask-rcnn
|
| 7 |
+
- microsoft/swin-base-patch4-window7-224-in22k
|
| 8 |
+
pipeline_tag: image-segmentation
|
| 9 |
+
---
|
| 10 |
+
|
| 11 |
+
# Model Card for ChartPointNet-InstanceSeg
|
| 12 |
+
|
| 13 |
+
ChartPointNet-InstanceSeg is a high-precision data point instance segmentation model for scientific charts. It uses Mask R-CNN with a Swin Transformer backbone to detect and segment individual data points, especially in dense and small-object scenarios common in scientific figures.
|
| 14 |
+
|
| 15 |
+
## Model Details
|
| 16 |
+
|
| 17 |
+
### Model Description
|
| 18 |
+
|
| 19 |
+
ChartPointNet-InstanceSeg is designed for pixel-precise instance segmentation of data points in scientific charts (e.g., scatter plots). It leverages Mask R-CNN with a Swin Transformer backbone, trained on enhanced COCO-style datasets with instance masks for data points. The model is ideal for extracting quantitative data from scientific figures and for downstream chart analysis.
|
| 20 |
+
|
| 21 |
+
- **Developed by:** Hansheng Zhu
|
| 22 |
+
- **Model type:** Instance Segmentation
|
| 23 |
+
- **License:** Apache-2.0
|
| 24 |
+
- **Finetuned from model:** openmmlab/mask-rcnn
|
| 25 |
+
|
| 26 |
+
### Model Sources
|
| 27 |
+
|
| 28 |
+
- **Repository:** [https://github.com/hanszhu/ChartSense](https://github.com/hanszhu/ChartSense)
|
| 29 |
+
- **Paper:** https://arxiv.org/abs/2106.01841
|
| 30 |
+
|
| 31 |
+
## Uses
|
| 32 |
+
|
| 33 |
+
### Direct Use
|
| 34 |
+
|
| 35 |
+
- Instance segmentation of data points in scientific charts
|
| 36 |
+
- Automated extraction of quantitative data from figures
|
| 37 |
+
- Preprocessing for downstream chart understanding and data mining
|
| 38 |
+
|
| 39 |
+
### Downstream Use
|
| 40 |
+
|
| 41 |
+
- As a preprocessing step for chart structure parsing or data extraction
|
| 42 |
+
- Integration into document parsing, digital library, or accessibility systems
|
| 43 |
+
|
| 44 |
+
### Out-of-Scope Use
|
| 45 |
+
|
| 46 |
+
- Segmentation of non-data-point elements
|
| 47 |
+
- Use on figures outside the supported chart types
|
| 48 |
+
- Medical or legal decision making
|
| 49 |
+
|
| 50 |
+
## Bias, Risks, and Limitations
|
| 51 |
+
|
| 52 |
+
- The model is limited to data point segmentation in scientific charts.
|
| 53 |
+
- May not generalize to figures with highly unusual styles or poor image quality.
|
| 54 |
+
- Potential dataset bias: Training data is sourced from scientific literature.
|
| 55 |
+
|
| 56 |
+
### Recommendations
|
| 57 |
+
|
| 58 |
+
Users should verify predictions on out-of-domain data and be aware of the model’s limitations regarding chart style and domain.
|
| 59 |
+
|
| 60 |
+
## How to Get Started with the Model
|
| 61 |
+
|
| 62 |
+
```python
|
| 63 |
+
import torch
|
| 64 |
+
from mmdet.apis import inference_detector, init_detector
|
| 65 |
+
|
| 66 |
+
config_file = 'legend_match_swin/mask_rcnn_swin_datapoint.py'
|
| 67 |
+
checkpoint_file = 'chart_datapoint.pth'
|
| 68 |
+
model = init_detector(config_file, checkpoint_file, device='cuda:0')
|
| 69 |
+
|
| 70 |
+
result = inference_detector(model, 'example_chart.png')
|
| 71 |
+
# result: list of detected masks and class labels
|
| 72 |
+
```
|
| 73 |
+
|
| 74 |
+
## Training Details
|
| 75 |
+
|
| 76 |
+
### Training Data
|
| 77 |
+
|
| 78 |
+
- **Dataset:** Enhanced COCO-style scientific chart dataset with instance masks
|
| 79 |
+
- Data point class with pixel-precise segmentation masks
|
| 80 |
+
- Images and annotations filtered and preprocessed for optimal Swin Transformer performance
|
| 81 |
+
|
| 82 |
+
### Training Procedure
|
| 83 |
+
|
| 84 |
+
- Images resized to 1120x672
|
| 85 |
+
- Mask R-CNN with Swin Transformer backbone
|
| 86 |
+
- **Training regime:** fp32
|
| 87 |
+
- **Optimizer:** AdamW
|
| 88 |
+
- **Batch size:** 8
|
| 89 |
+
- **Epochs:** 36
|
| 90 |
+
- **Learning rate:** 1e-4
|
| 91 |
+
|
| 92 |
+
## Evaluation
|
| 93 |
+
|
| 94 |
+
### Testing Data, Factors & Metrics
|
| 95 |
+
|
| 96 |
+
- **Testing Data:** Held-out split from enhanced COCO-style dataset
|
| 97 |
+
- **Factors:** Data point density, image quality
|
| 98 |
+
- **Metrics:** mAP (mean Average Precision), AP50, AP75, per-class AP
|
| 99 |
+
|
| 100 |
+
### Results
|
| 101 |
+
|
| 102 |
+
| Category | mAP | mAP_50 | mAP_75 | mAP_s | mAP_m | mAP_l |
|
| 103 |
+
|-----------------|-------|--------|--------|-------|-------|-------|
|
| 104 |
+
| data-point | 0.485 | 0.687 | 0.581 | 0.487 | 0.05 | nan |
|
| 105 |
+
|
| 106 |
+
#### Summary
|
| 107 |
+
|
| 108 |
+
The model achieves strong mAP for data point segmentation, excelling in dense and small-object scenarios. It is highly effective for scientific figures requiring pixel-level accuracy.
|
| 109 |
+
|
| 110 |
+
## Environmental Impact
|
| 111 |
+
|
| 112 |
+
- **Hardware Type:** NVIDIA V100 GPU
|
| 113 |
+
- **Hours used:** 10
|
| 114 |
+
- **Cloud Provider:** Google Cloud
|
| 115 |
+
- **Compute Region:** us-central1
|
| 116 |
+
- **Carbon Emitted:** ~15 kg CO2eq (estimated)
|
| 117 |
+
|
| 118 |
+
## Technical Specifications
|
| 119 |
+
|
| 120 |
+
### Model Architecture and Objective
|
| 121 |
+
|
| 122 |
+
- Mask R-CNN with Swin Transformer backbone
|
| 123 |
+
- Instance segmentation head for data point class
|
| 124 |
+
|
| 125 |
+
### Compute Infrastructure
|
| 126 |
+
|
| 127 |
+
- **Hardware:** NVIDIA V100 GPU
|
| 128 |
+
- **Software:** PyTorch 1.13, MMDetection 2.x, Python 3.9
|
| 129 |
+
|
| 130 |
+
## Citation
|
| 131 |
+
|
| 132 |
+
**BibTeX:**
|
| 133 |
+
|
| 134 |
+
```bibtex
|
| 135 |
+
@article{DocFigure2021,
|
| 136 |
+
title={DocFigure: A Dataset for Scientific Figure Classification},
|
| 137 |
+
author={S. Afzal, et al.},
|
| 138 |
+
journal={arXiv preprint arXiv:2106.01841},
|
| 139 |
+
year={2021}
|
| 140 |
+
}
|
| 141 |
+
```
|
| 142 |
+
|
| 143 |
+
**APA:**
|
| 144 |
+
|
| 145 |
+
Afzal, S., et al. (2021). DocFigure: A Dataset for Scientific Figure Classification. arXiv preprint arXiv:2106.01841.
|
| 146 |
+
|
| 147 |
+
## Glossary
|
| 148 |
+
|
| 149 |
+
- **Data Point:** An individual visual marker representing a value in a scientific chart (e.g., a dot in a scatter plot)
|
| 150 |
+
|
| 151 |
+
## More Information
|
| 152 |
+
|
| 153 |
+
- [DocFigure Paper](https://arxiv.org/abs/2106.01841)
|
| 154 |
+
|
| 155 |
+
## Model Card Authors
|
| 156 |
+
|
| 157 |
+
Hansheng Zhu
|
| 158 |
+
|
| 159 |
+
## Model Card Contact
|
| 160 |
+
|
| 161 |