chrom string | pos int64 | ref string | alt string | label int64 | CADD float64 | phyloP-100v float64 | phyloP-241m float64 | phastCons-100v float64 | GPN-MSA float32 | NT float64 | NT-v2 float64 | HyenaDNA float32 | Evo2-1B float64 | Evo2-7B float64 | GENERator-1B float64 | GENERator-3B float64 | GENERator-v2-1B float64 | GENERator-v2-3B float64 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
X | 154,966,082 | T | C | 1 | 3.63397 | 4.582 | 5.274 | 1 | 6.375 | 1.131045 | 0.249131 | 0.000001 | 2.522731 | 5.834168 | 2.416682 | 3.533506 | 1.431423 | 3.218494 |
X | 154,966,097 | C | A | 1 | 3.474777 | 6.049 | 7.737 | 1 | 9.539063 | -0.816993 | -0.588527 | -0.000001 | 4.101957 | 5.517885 | 7.571335 | 7.204635 | 6.561452 | 4.274599 |
X | 154,966,120 | C | A | 1 | 2.759332 | 1.972 | 2.045 | 1 | 7.433594 | 0.047774 | 0.0271 | 0.000001 | 2.784285 | 5.415719 | 3.480327 | 1.343095 | 3.901687 | 1.384005 |
X | 154,966,471 | T | C | 1 | 4.194012 | 6.406 | 5.264 | 1 | 8.273438 | 1.00683 | 0.389806 | 0 | 1.889168 | 6.274257 | 4.492684 | 4.881578 | 3.696899 | 4.955901 |
X | 154,966,483 | A | C | 1 | 3.895347 | 7.421 | 5.26 | 1 | 10.765625 | 1.31236 | 0.621984 | 0.000003 | 4.568725 | 7.917523 | 6.551372 | 9.743715 | 6.770343 | 9.393551 |
X | 154,966,523 | A | G | 1 | 3.786327 | 4.706 | 5.259 | 1 | 7.371094 | -0.622191 | -0.49809 | 0 | -0.495321 | 6.176767 | 0.087186 | 2.486074 | -0.304673 | 2.593037 |
X | 154,966,525 | C | T | 1 | 3.8673 | 4.017 | 7.719 | 1 | 6.316406 | -1.051024 | -0.47719 | 0.000006 | -0.281292 | 4.370192 | -0.888093 | 4.162023 | -0.370133 | 3.583615 |
X | 154,966,526 | G | A | 1 | 4.236433 | 5.383 | 7.649 | 1 | 6.320313 | 0.570682 | -0.042152 | 0.000002 | -1.041815 | 5.32046 | 2.324189 | 4.374795 | 2.42797 | 4.428164 |
X | 154,966,654 | C | G | 1 | 3.258059 | 5.65 | 7.718 | 1 | 7.890625 | -1.300746 | -1.091531 | 0.000001 | -1.216793 | 7.274238 | -0.593784 | 4.850787 | -0.361918 | 3.644521 |
X | 154,966,664 | C | A | 1 | 2.93222 | 4.053 | 7.718 | 0.997 | 8.242188 | 0.369491 | 0.057669 | -0.000001 | -0.049393 | 6.825312 | 3.47107 | 1.189957 | 1.83171 | 1.53037 |
X | 154,966,677 | T | G | 1 | 3.271233 | 0.835 | 2.124 | 1 | 6.347656 | 2.200885 | 2.408909 | -0.000005 | 3.200556 | 6.283322 | 3.080979 | 3.97866 | 3.738355 | 5.256121 |
X | 154,969,355 | A | G | 1 | 3.687442 | 6.725 | 5.238 | 1 | 9.34375 | 2.691443 | 0.473767 | -0.000002 | 2.835564 | 8.257142 | 4.956816 | 9.326809 | 3.470151 | 9.558674 |
X | 154,969,360 | A | G | 1 | 3.470514 | 6.725 | 5.238 | 0.969 | 9.429688 | 4.039584 | 1.922838 | -0.000002 | 2.702075 | 7.753696 | 2.272628 | 4.674243 | 3.068774 | 3.950231 |
X | 154,969,400 | T | C | 1 | 3.501066 | 4.179 | 5.242 | 1 | 6.316406 | 0.238599 | 0.018914 | -0.000002 | 0.199757 | 3.546117 | 1.264431 | 0.376561 | 2.229884 | -0.116756 |
X | 154,969,405 | A | G | 1 | 3.937241 | 4.889 | 5.238 | 1 | 8.773438 | 0.428604 | 0.622208 | -0.000002 | 0.585314 | 6.040192 | 1.851614 | 4.399564 | 0.350856 | 5.183656 |
X | 154,969,417 | G | A | 1 | 3.918424 | 7.208 | 7.618 | 1 | 5.046875 | -1.909546 | -2.360599 | 0.000003 | -2.985738 | 4.143135 | 0.041143 | -1.699749 | -4.393551 | 1.187121 |
X | 154,969,438 | C | A | 1 | 3.705846 | 4.078 | 7.691 | 1 | 7.328125 | -0.516844 | -0.206977 | 0.000004 | -0.630449 | 6.452473 | 4.710657 | 0.707167 | 3.846776 | 0.925021 |
X | 154,969,438 | C | T | 1 | 3.751929 | 4.078 | 7.691 | 1 | 5.894531 | -0.246499 | -0.238281 | 0.000003 | -0.119623 | 3.636081 | 2.114147 | -0.116177 | 2.032101 | -0.239458 |
X | 154,969,444 | T | A | 1 | 3.362459 | 2.319 | 1.553 | 0.883 | 7.601563 | -0.080792 | -0.023989 | -0 | -0.175353 | 6.515956 | 0.170651 | -0.316873 | -2.906144 | 0.164314 |
X | 154,969,459 | G | A | 1 | 3.585004 | 5.486 | 7.622 | 1 | 6.5 | 0.527393 | 0.532644 | -0 | 0.271745 | 5.480639 | -1.484728 | 2.554023 | -0.627593 | 4.395751 |
X | 154,969,468 | T | C | 1 | 3.800793 | 4.148 | 5.244 | 1 | 7.738281 | 0.339962 | 0.633821 | 0 | 0.309005 | 7.389053 | 2.599533 | 2.484096 | 1.405418 | 4.731547 |
X | 154,969,469 | C | T | 1 | 3.635378 | 2.985 | 7.691 | 0.993 | 4.664063 | -0.293383 | 0.017912 | 0.000004 | -0.287682 | 7.047785 | 1.167855 | 1.536209 | -0.965434 | 3.358857 |
X | 154,969,486 | A | C | 1 | 3.742241 | 6.742 | 5.24 | 1 | 10.242188 | 0.410984 | 0.305263 | -0.000001 | 0.375201 | 8.361685 | 5.365887 | 5.634084 | 5.762715 | 6.052851 |
X | 154,969,508 | C | T | 1 | 3.986433 | 5.712 | 7.691 | 1 | 6.675781 | -0.223585 | 0.094776 | -0.000001 | -0.102809 | 7.459369 | 4.120982 | 6.215263 | 5.096961 | 6.396167 |
X | 154,984,708 | A | T | 1 | 4.010658 | 6.291 | 5.051 | 1 | 9.4375 | -0.528225 | -0.389036 | 0 | -0.268814 | -0.144739 | -0.177812 | -0.458271 | -0.113288 | -0.09802 |
X | 154,984,714 | T | C | 1 | 3.574958 | 5.41 | 5.028 | 1 | 8.65625 | 0.156473 | 0.16005 | -0.000003 | 0.292525 | 0.325422 | 0.385447 | 1.785346 | 0.012354 | 1.539136 |
X | 154,987,237 | C | A | 1 | 6.64965 | 4.33 | 5.966 | 1 | 9.367188 | -0.747552 | -0.447566 | 0 | -0.32675 | -0.372675 | -0.336377 | -0.377575 | -0.047104 | -0.153896 |
X | 154,987,242 | T | A | 1 | 3.759031 | 3.219 | 3.738 | 1 | 7.574219 | -0.2161 | -0.288233 | -0.000001 | -0.058411 | 0.021979 | 0.131873 | 1.323783 | 0.273561 | 0.758263 |
X | 154,992,962 | A | G | 1 | 3.263367 | 8.126 | 5.265 | 1 | 6.882813 | -0.224431 | 0.015584 | 0.000001 | 0.04879 | 0.02034 | 3.332317 | 4.319282 | 3.053725 | 4.032975 |
X | 154,992,971 | G | A | 1 | 3.700813 | 6.819 | 7.658 | 1 | 7.339844 | 1.438515 | 0.812544 | -0.000001 | 4.051463 | 4.308415 | 2.277722 | 3.107761 | 3.253314 | 2.36209 |
X | 154,992,983 | T | G | 1 | 3.071418 | 1.988 | 1.169 | 1 | 7.148438 | -0.001867 | 0.22902 | -0 | 3.448641 | 4.74667 | 4.204587 | 4.23737 | 4.325699 | 4.387486 |
X | 154,992,996 | C | T | 1 | 3.265026 | 1.923 | 7.728 | 0.939 | 5.347656 | -0.054009 | -0.048335 | -0 | 4.250614 | 3.345669 | -0.054835 | 3.523667 | -0.755271 | 3.321607 |
X | 154,993,046 | C | A | 1 | 2.804793 | 2.557 | 6.022 | 0.534 | 7.074219 | -0.471045 | -0.453006 | -0 | 4.490881 | 4.794506 | -0.457202 | 7.067265 | -1.932085 | 7.798078 |
X | 154,993,127 | G | A | 1 | 2.625669 | 4.035 | 2.133 | 1 | 6.09375 | -0.592985 | -0.643177 | -0.000002 | 0.813929 | 3.457573 | 1.895046 | 3.752469 | 1.946174 | 4.823155 |
X | 154,993,133 | T | C | 1 | 3.502597 | 7.03 | 5.269 | 1 | 7.785156 | 0.534074 | 0.66276 | -0.000001 | 1.673976 | 4.99995 | 3.586774 | 6.604057 | 5.292497 | 7.547889 |
X | 154,993,139 | T | C | 1 | 3.328593 | 7.03 | 5.269 | 1 | 7.675781 | 0.278535 | 0.399015 | 0 | 2.8596 | 6.109707 | 4.01085 | 5.880799 | 4.859929 | 6.406345 |
X | 154,996,973 | C | G | 1 | 4.169719 | 6.472 | 7.537 | 1 | 10.734375 | 3.007861 | 2.962863 | -0.000002 | 2.031651 | 2.828159 | 2.633795 | 2.770142 | 3.256518 | 3.814202 |
X | 154,997,011 | A | C | 1 | 3.737467 | 7.668 | 5.221 | 1 | 10.09375 | 1.012955 | 0.839605 | -0.000006 | 4.85203 | 9.267824 | 5.564684 | 7.5248 | 3.641888 | 8.280006 |
X | 154,997,033 | T | C | 1 | 3.041474 | 1.507 | 5.224 | 1 | 5.414063 | 0.241857 | 0.064576 | -0.000002 | 3.071832 | 6.295251 | 0.333659 | 1.525652 | 1.044068 | 2.013092 |
X | 154,997,038 | T | G | 1 | 3.449766 | 3 | 5.224 | 1 | 8.40625 | 3.063863 | 3.447208 | -0.000001 | 6.342685 | 8.174123 | 6.378762 | 7.352608 | 6.821085 | 6.62159 |
X | 154,997,050 | A | T | 1 | 3.739562 | 7.668 | 5.221 | 1 | 10.273438 | -0.152172 | -0.006319 | -0.000001 | 1.836711 | 7.502922 | 4.351405 | 4.556818 | 6.101507 | 4.764907 |
X | 154,997,059 | T | C | 1 | 3.79491 | 6.56 | 5.224 | 1 | 8.226563 | 0.258413 | 0.350985 | 0.000003 | 5.84607 | 6.536478 | 3.923438 | 7.390207 | 4.820045 | 7.55256 |
X | 154,997,065 | A | G | 1 | 3.390466 | 3.005 | 5.221 | 1 | 6.476563 | 0.175063 | 0.327609 | 0 | 4.900623 | 3.833905 | 4.242919 | 4.55697 | 4.025833 | 5.226542 |
X | 154,997,065 | A | T | 1 | 3.546287 | 3.005 | 5.221 | 1 | 8.0625 | 0.036226 | 0.338541 | -0.000002 | 5.760447 | 7.359183 | 4.892207 | 7.436481 | 4.870141 | 7.985341 |
X | 154,997,086 | C | A | 1 | 3.366295 | 6.472 | 7.662 | 1 | 9.734375 | -0.676088 | -0.733333 | 0 | 7.529671 | 8.89313 | 7.45649 | 7.490803 | 8.327728 | 8.461504 |
X | 154,997,095 | C | T | 1 | 4.106276 | 6.472 | 7.662 | 1 | 8.882813 | -0.438893 | -0.375322 | -0.000003 | 5.734583 | 6.491321 | 2.961453 | 6.183155 | 3.341392 | 7.046659 |
X | 155,022,432 | C | A | 1 | 1.733919 | -0.847 | -2.514 | 0 | 2.003906 | -0.296543 | -0.252541 | -0.000001 | -0.130215 | -0.183369 | -0.623137 | -0.626641 | -0.894683 | -0.09801 |
X | 155,022,449 | T | C | 1 | 3.242551 | 3.547 | 5.254 | 0.994 | 6.078125 | 0.070508 | 0.369057 | -0 | 0.218525 | 0.123794 | 0.197419 | 0.429125 | 0.381146 | 0.259363 |
X | 155,022,464 | T | A | 1 | 3.099694 | 2.097 | 3.92 | 0.838 | 7.332031 | 0.140005 | 0.333935 | 0.000001 | 0.442688 | 0.347274 | 0.221932 | 0.455109 | 0.716869 | 0.463887 |
X | 155,022,476 | A | C | 1 | 3.793442 | 4.138 | 5.25 | 1 | 7.507813 | 0.257441 | 0.268353 | -0.000005 | 0.144451 | 0.237801 | 1.240028 | 0.865611 | 2.237929 | 0.296261 |
X | 155,260,871 | C | T | 1 | 3.404033 | 7.503 | 7.65 | 1 | 10.539063 | -0.132743 | 0.049188 | -0.000001 | 4.681637 | 6.28242 | 8.19953 | 6.130765 | 6.696895 | 8.297631 |
X | 155,260,942 | G | T | 1 | 3.851782 | 9.515 | 7.581 | 1 | 11.882813 | -0.596787 | 5.639682 | 0.000001 | 8.32168 | 7.993647 | 9.20239 | 11.454103 | 9.779603 | 10.805304 |
X | 155,264,287 | A | G | 1 | 3.84664 | 5.799 | 5.042 | 1 | 10.164063 | 2.703907 | 0.030206 | 0.000001 | 7.334986 | 9.233081 | 8.416931 | 10.004988 | 10.100381 | 11.348615 |
X | 156,010,159 | A | G | 0 | -0.019125 | -1.977 | -0.195 | 0 | -0.057617 | -1.900115 | -1.320338 | 0.000002 | -3.125576 | -3.134703 | -3.506101 | -3.057188 | -2.65826 | -2.415291 |
X | 156,010,162 | A | G | 0 | -0.604101 | 0 | -0.91 | 0.002 | -0.19043 | -1.287663 | -0.933185 | 0.000001 | -1.220167 | -2.017956 | -2.064198 | -2.363585 | -1.589047 | -1.91815 |
X | 156,021,686 | C | T | 0 | 1.570513 | 3.544 | 7.586 | 1 | 4.179688 | -0.143429 | 0.140621 | -0.000001 | 0.305097 | 0.483229 | 0.474492 | 0.415844 | 0.365095 | 0.38397 |
X | 156,022,062 | G | A | 0 | 1.151562 | 6.803 | 5.976 | 1 | 6.75 | 1.760839 | 1.533112 | 0.000001 | 4.389995 | 5.876955 | 3.135258 | 4.877477 | 3.18986 | 3.89783 |
X | 156,022,092 | C | T | 0 | 1.114651 | 2.109 | 4.822 | 0.96 | 5.042969 | 0.258962 | 0.403969 | -0.000001 | 3.835694 | 4.786998 | 3.429012 | 4.239104 | 4.742675 | 3.86711 |
X | 156,023,118 | G | T | 0 | 1.17623 | 4.017 | 5.933 | 1 | 5.953125 | -0.949968 | -3.101255 | 0.000001 | 6.688063 | 7.38633 | 7.979181 | 6.266744 | 7.526087 | 5.860087 |
X | 156,024,251 | A | C | 0 | 1.868737 | 6.335 | 0.287 | 1 | 3.390625 | 0.174444 | 0.291583 | 0.000003 | 2.967333 | 3.7603 | 5.874395 | 6.300234 | 6.022774 | 6.333701 |
Y | 2,787,207 | G | A | 1 | 2.891511 | 0.519 | 6.656 | 0.973 | 1.504883 | -0.651278 | 1.078304 | 0.000001 | -0.745594 | -0.590199 | -0.538483 | -0.591456 | -0.610945 | -0.775885 |
Y | 2,787,224 | T | A | 1 | 2.728874 | 5.728 | 4.685 | 1 | 5.074219 | -0.15008 | 3.952171 | 0.000006 | -0.217185 | -0.541039 | -0.214736 | 2.005929 | -0.347487 | -0.213246 |
Y | 2,787,224 | T | C | 1 | 3.420757 | 5.728 | 4.685 | 1 | 3.246094 | 0.460398 | 5.542046 | 0 | -0.30486 | -0.497237 | -0.132291 | 1.70008 | -0.188616 | -0.382417 |
Y | 2,787,267 | C | T | 1 | 2.708585 | 5.679 | 6.835 | 1 | 3.490234 | 0.030907 | 3.303217 | 0.000001 | 3.658367 | 4.384045 | 2.194315 | 4.255436 | 1.88172 | 4.698458 |
Y | 2,787,278 | A | G | 1 | 2.991749 | 3.839 | 4.667 | 1 | 4.65625 | -0.195135 | 1.313605 | 0.000002 | 3.898926 | 5.102671 | -0.299058 | 3.288994 | 1.393732 | 2.629772 |
Y | 2,787,287 | T | A | 1 | 2.909237 | 5.76 | 4.655 | 1 | 5.761719 | 2.255808 | 4.369573 | -0.000002 | 3.441404 | 5.317859 | 6.192668 | 6.651538 | 6.150183 | 6.288893 |
Y | 2,787,320 | C | T | 1 | 2.895614 | 5.679 | 6.835 | 1 | 3.859375 | -1.30202 | 3.923913 | 0.000001 | 3.011818 | 3.005084 | 4.5642 | 5.257499 | 4.790485 | 6.318103 |
Y | 2,787,321 | C | G | 1 | 2.999386 | 5.679 | 5.185 | 1 | 5.515625 | -0.012282 | 5.264319 | 0.000003 | 4.752545 | 4.039219 | 5.711746 | 5.431139 | 5.49214 | 5.776897 |
Y | 2,787,334 | G | C | 1 | 2.739265 | 4.195 | 5.132 | 1 | 5.121094 | 0.24755 | 1.474387 | -0.000001 | 3.896519 | 3.040468 | 3.217383 | 6.12973 | 2.787997 | 6.85867 |
Y | 2,787,401 | A | G | 1 | 2.391004 | 6.626 | 4.625 | 1 | 3.591797 | -0.011205 | 2.584476 | 0.000001 | 1.673976 | 1.242045 | 3.437011 | 2.696626 | 3.4662 | 2.807898 |
Y | 2,787,412 | C | T | 1 | 2.35107 | 5.679 | 6.769 | 1 | 4.917969 | 0.184408 | 2.073346 | 0.000001 | 3.017711 | 2.969484 | 4.661392 | 4.872596 | 4.696136 | 4.992014 |
Y | 2,787,426 | C | G | 1 | 2.215825 | 5.679 | 5.114 | 1 | 6.515625 | -0.277636 | 2.885326 | 0.000005 | 2.81448 | 5.071166 | 2.892143 | 4.286964 | 4.251124 | 4.653461 |
Y | 2,787,515 | C | A | 1 | 1.614399 | -0.091 | 0.12 | 0 | 0.703613 | 0.543504 | 0.454675 | 0.000003 | 0.553595 | 0.532596 | 1.288724 | 1.337532 | 1.09078 | 1.205921 |
Y | 2,787,551 | C | T | 1 | 0.541464 | 0.675 | 0.12 | 0.989 | 0.416016 | -0.315841 | -0.258 | -0.000003 | -0.350483 | -0.218689 | -0.374195 | -0.060931 | -0.36239 | -0.126498 |
Y | 7,063,898 | A | T | 1 | 3.594089 | 6.04 | 5.484 | 1 | 7.085938 | -0.856762 | -0.948588 | -0 | -0.142748 | 0.146835 | 2.925285 | 2.607161 | 4.642438 | 3.100216 |
Y | 12,720,687 | G | T | 0 | 5.188906 | 0.323 | -1.88 | 0.995 | 2.302734 | -0.260266 | -0.480734 | 0.000001 | 0.398908 | -0.458182 | 0.496536 | 1.034499 | 0.54544 | 1.721998 |
Subsets and Splits
ClinVar Pathogenic Variants
Retrieves all records labeled as pathogenic variants from the ClinVar VEP results dataset, providing basic filtering but offering limited analytical insight beyond simple data retrieval.
Random ClinVar VEP Results Sample
Retrieves a sample of variant effect predictions labeled as pathogenic, which helps identify potentially harmful genetic variants but doesn't provide deeper analytical insights.
Random Sample of ClinVar VEP Results
Randomly samples 2000 rows from clinical variant effect predictor results, providing basic dataset exploration but offering no meaningful analytical insights or patterns.